- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Class | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | caeRem3-7 | mir-924 | mml-miR-924 | 18/20 | chrUn | + | 52-70 | 24837955-24838047 | 0.818434 | Ortholog | 3/8 | 1/8 |
2 | caeRem3-65 | mir-87 | aga-miR-87 | 19/21 | chrUn | - | 50-70 | 126942581-126942655 | 0.99623 | Ortholog | 21/27 | 1/39 |
3 | caeRem3-65 | mir-87 | cel-miR-87 | 22/22 | chrUn | - | 49-70 | 126942583-126942653 | 0.993327 | Ortholog | 21/27 | 1/39 |
4 | caeRem3-65 | mir-87 | tca-miR-87 | 21/21 | chrUn | - | 50-70 | 126942582-126942654 | 0.996114 | Ortholog | 21/27 | 1/39 |
5 | caeRem3-65 | mir-87 | cbr-miR-87 | 20/20 | chrUn | - | 50-69 | 126942582-126942654 | 0.997113 | Ortholog | 21/27 | 1/39 |
6 | caeRem3-65 | mir-87 | sme-miR-87a | 18/20 | chrUn | - | 51-69 | 126942582-126942654 | 0.997767 | Ortholog | 21/27 | 1/39 |
7 | caeRem3-65 | mir-87 | bmo-miR-87 | 19/21 | chrUn | - | 50-69 | 126942583-126942653 | 0.997553 | Ortholog | 21/27 | 1/39 |
8 | caeRem3-1 | mir-86 | cel-miR-86 | 23/23 | chrUn | + | 8-30 | 4696125-4696202 | 0.99796 | Ortholog | 2/4 | 1/5 |
9 | caeRem3-21 | mir-84 | cbr-miR-84 | 21/22 | chrUn | + | 15-36 | 128707156-128707239 | 0.997599 | Ortholog | 2/3 | 1/4 |
10 | caeRem3-13 | mir-82 | cel-miR-82 | 22/22 | chrUn | + | 51-72 | 34149155-34149235 | 0.992335 | Ortholog | 2/5 | 1/7 |
11 | caeRem3-18 | mir-79 | spu-miR-79 | 20/22 | chrUn | + | 52-71 | 105203829-105203906 | 0.856898 | Ortholog | 22/28 | 1/45 |
12 | caeRem3-18 | mir-79 | cel-miR-79 | 22/22 | chrUn | + | 51-72 | 105203830-105203904 | 0.81722 | Ortholog | 22/28 | 1/45 |
13 | caeRem3-6 | mir-789 | cel-miR-789 | 22/23 | chrUn | + | 49-70 | 15578002-15578089 | 0.944943 | Ortholog | 2/5 | 2/11 |
14 | caeRem3-49 | mir-789 | cel-miR-789 | 21/23 | chrUn | - | 49-70 | 52159870-52159946 | 0.995758 | Ortholog | 2/5 | 2/11 |
15 | caeRem3-58 | mir-788 | cel-miR-788 | 24/24 | chrUn | - | 13-36 | 100052250-100052335 | 0.904086 | Ortholog | 2/3 | 1/4 |
16 | caeRem3-34 | mir-785 | cbr-miR-785 | 19/21 | chrUn | - | 50-70 | 4287778-4287853 | 0.999634 | Ortholog | 2/5 | 1/6 |
17 | caeRem3-62 | mir-784 | cbr-miR-784 | 20/22 | chrUn | - | 14-35 | 111107632-111107715 | 0.994026 | Ortholog | 2/3 | 1/4 |
18 | caeRem3-50 | mir-77 | cel-miR-77 | 22/22 | chrUn | - | 49-70 | 53585362-53585436 | 0.988413 | Ortholog | 2/5 | 2/8 |
19 | caeRem3-38 | mir-77 | cel-miR-77 | 22/22 | chrUn | - | 42-63 | 10928301-10928371 | 0.966213 | Ortholog | 2/5 | 2/8 |
20 | caeRem3-59 | mir-75 | cbr-miR-75 | 21/22 | chrUn | - | 49-70 | 103833720-103833794 | 0.87283 | Ortholog | 2/5 | 1/5 |
21 | caeRem3-60 | mir-74 | cbr-miR-74 | 21/22 | chrUn | - | 49-70 | 103837411-103837485 | 0.987035 | Ortholog | 2/5 | 2/7 |
22 | caeRem3-61 | mir-74 | cel-miR-74 | 20/22 | chrUn | - | 49-70 | 103837542-103837617 | 0.946275 | Ortholog | 2/5 | 2/7 |
23 | caeRem3-57 | mir-71 | spu-miR-71 | 21/23 | chrUn | - | 14-34 | 83434609-83434691 | 0.996922 | Ortholog | 13/17 | 1/25 |
24 | caeRem3-57 | mir-71 | cel-miR-71 | 19/19 | chrUn | - | 14-32 | 83434609-83434691 | 0.997896 | Ortholog | 13/17 | 1/25 |
25 | caeRem3-31 | mir-7 | ssc-miR-7 | 19/21 | chrUn | + | 21-41 | 148351471-148351560 | 0.893049 | Ortholog | 46/63 | 3/143 |
26 | caeRem3-26 | mir-7 | ssc-miR-7 | 19/21 | chrUn | + | 21-41 | 139831506-139831595 | 0.886743 | Ortholog | 46/63 | 3/143 |
27 | caeRem3-48 | mir-7 | gga-miR-7 | 20/22 | chrUn | - | 22-43 | 43284346-43284437 | 0.81353 | Ortholog | 46/63 | 3/143 |
28 | caeRem3-26 | mir-7 | gga-miR-7 | 20/22 | chrUn | + | 21-42 | 139831506-139831595 | 0.896588 | Ortholog | 46/63 | 3/143 |
29 | caeRem3-31 | mir-7 | gga-miR-7 | 20/22 | chrUn | + | 21-42 | 148351471-148351560 | 0.90208 | Ortholog | 46/63 | 3/143 |
30 | caeRem3-48 | mir-7 | ssc-miR-7 | 19/21 | chrUn | - | 22-42 | 43284346-43284437 | 0.803764 | Ortholog | 46/63 | 3/143 |
31 | caeRem3-63 | mir-62 | cel-miR-62 | 22/22 | chrUn | - | 49-70 | 111447772-111447854 | 0.99836 | Ortholog | 2/5 | 1/6 |
32 | caeRem3-25 | mir-619 | mml-miR-619 | 18/20 | chrUn | + | 53-70 | 133942710-133942811 | 0.880266 | Ortholog | 3/7 | 1/7 |
33 | caeRem3-64 | mir-61 | cbr-miR-61 | 21/23 | chrUn | - | 49-71 | 126693029-126693107 | 0.992021 | Ortholog | 3/5 | 1/7 |
34 | caeRem3-52 | mir-59 | cel-miR-59 | 23/23 | chrUn | - | 49-71 | 57015064-57015137 | 0.998216 | Ortholog | 1/2 | 1/2 |
35 | caeRem3-30 | mir-58 | cel-miR-58 | 22/22 | chrUn | + | 51-72 | 147063298-147063372 | 0.897402 | Ortholog | 2/4 | 1/5 |
36 | caeRem3-42 | mir-57 | cel-miR-57 | 24/24 | chrUn | - | 11-34 | 19014099-19014180 | 0.919583 | Ortholog | 2/4 | 1/4 |
37 | caeRem3-14 | mir-55 | cel-miR-55 | 21/23 | chrUn | + | 49-71 | 90882918-90882996 | 0.999676 | Ortholog | 2/4 | 1/5 |
38 | caeRem3-41 | mir-50 | cel-miR-50 | 22/22 | chrUn | - | 10-31 | 17804090-17804170 | 0.997348 | Ortholog | 2/4 | 1/5 |
39 | caeRem3-41 | mir-50 | cbr-miR-50 | 23/24 | chrUn | - | 10-33 | 17804090-17804170 | 0.998296 | Ortholog | 2/4 | 1/5 |
40 | caeRem3-39 | mir-49 | cel-miR-49 | 22/22 | chrUn | - | 49-70 | 14818113-14818187 | 0.957201 | Ortholog | 2/3 | 1/3 |
41 | caeRem3-43 | mir-47 | cel-miR-47 | 21/22 | chrUn | - | 48-69 | 22211390-22211461 | 0.988096 | Ortholog | 2/5 | 2/10 |
42 | caeRem3-16 | mir-47 | cel-miR-47 | 22/22 | chrUn | + | 51-72 | 96562102-96562183 | 0.991228 | Ortholog | 2/5 | 2/10 |
43 | caeRem3-35 | mir-44 | cel-miR-44 | 21/21 | chrUn | - | 50-70 | 8356894-8356965 | 0.994909 | Ortholog | 2/5 | 2/11 |
44 | caeRem3-2 | mir-44 | cel-miR-44 | 21/21 | chrUn | + | 51-71 | 8362377-8362449 | 0.94845 | Ortholog | 2/5 | 2/11 |
45 | caeRem3-23 | mir-429 | xla-miR-429 | 19/21 | chrUn | + | 51-71 | 132170892-132170970 | 0.903545 | Ortholog | 13/25 | 1/27 |
46 | caeRem3-37 | mir-41 | cbr-miR-41 | 20/21 | chrUn | - | 50-70 | 8778377-8778451 | 0.857407 | Ortholog | 2/4 | 1/4 |
47 | caeRem3-15 | mir-392 | cbr-miR-392 | 20/22 | chrUn | + | 51-72 | 96274956-96275040 | 0.995634 | Ortholog | 2/3 | 1/4 |
48 | caeRem3-44 | mir-358 | cel-miR-358 | 21/21 | chrUn | - | 50-70 | 25671716-25671787 | 0.947225 | Ortholog | 2/3 | 1/3 |
49 | caeRem3-5 | mir-355 | cel-miR-355 | 21/21 | chrUn | + | 13-33 | 9664776-9664857 | 0.998763 | Ortholog | 2/8 | 1/9 |
50 | caeRem3-11 | mir-34 | aga-miR-34 | 19/20 | chrUn | + | 28-46 | 33757024-33757118 | 0.99123 | Ortholog | 45/67 | 1/144 |
51 | caeRem3-11 | mir-34 | cin-miR-34 | 20/22 | chrUn | + | 26-47 | 33757024-33757118 | 0.97728 | Ortholog | 45/67 | 1/144 |
52 | caeRem3-11 | mir-34 | spu-miR-34 | 20/22 | chrUn | + | 28-48 | 33757023-33757117 | 0.943378 | Ortholog | 45/67 | 1/144 |
53 | caeRem3-46 | mir-31 | sme-miR-31a | 22/23 | chrUn | - | 13-35 | 30735475-30735557 | 0.998587 | Ortholog | 40/60 | 1/107 |
54 | caeRem3-46 | mir-31 | csa-miR-31 | 20/21 | chrUn | - | 14-33 | 30735475-30735557 | 0.99937 | Ortholog | 40/60 | 1/107 |
55 | caeRem3-46 | mir-31 | cfa-miR-31 | 21/23 | chrUn | - | 13-34 | 30735475-30735557 | 0.998205 | Ortholog | 40/60 | 1/107 |
56 | caeRem3-46 | mir-31 | cap-miR-31 | 21/21 | chrUn | - | 13-33 | 30735475-30735557 | 0.998879 | Ortholog | 40/60 | 1/107 |
57 | caeRem3-46 | mir-31 | ame-miR-31a | 21/22 | chrUn | - | 14-35 | 30735473-30735557 | 0.999106 | Ortholog | 40/60 | 1/107 |
58 | caeRem3-46 | mir-31 | bfl-miR-31 | 21/23 | chrUn | - | 14-34 | 30735475-30735557 | 0.998921 | Ortholog | 40/60 | 1/107 |
59 | caeRem3-43 | mir-281 | bmo-miR-281 | 21/22 | chrUn | - | 46-67 | 22211390-22211461 | 0.991462 | Ortholog | 25/33 | 2/68 |
60 | caeRem3-43 | mir-281 | tca-miR-281 | 19/21 | chrUn | - | 48-67 | 22211390-22211461 | 0.991761 | Ortholog | 25/33 | 2/68 |
61 | caeRem3-16 | mir-281 | bmo-miR-281 | 20/22 | chrUn | + | 50-71 | 96562101-96562182 | 0.978561 | Ortholog | 25/33 | 2/68 |
62 | caeRem3-53 | mir-263 | bmo-miR-263a | 19/21 | chrUn | - | 14-34 | 60549601-60549684 | 0.998949 | Ortholog | 16/26 | 1/53 |
63 | caeRem3-28 | mir-255 | cel-miR-255 | 22/22 | chrUn | + | 50-71 | 141254754-141254832 | 0.988247 | Ortholog | 2/3 | 1/4 |
64 | caeRem3-69 | mir-253 | cel-miR-253 | 21/21 | chrUn | - | 50-70 | 141474134-141474209 | 0.971762 | Ortholog | 2/6 | 1/8 |
65 | caeRem3-69 | mir-253 | cbr-miR-253 | 19/21 | chrUn | - | 25-43 | 141474127-141474220 | 0.958419 | Ortholog | 2/6 | 1/8 |
66 | caeRem3-3 | mir-252 | cbr-miR-252 | 23/23 | chrUn | + | 12-34 | 8843508-8843589 | 0.826624 | Ortholog | 10/22 | 1/31 |
67 | caeRem3-3 | mir-252 | cel-miR-252 | 23/23 | chrUn | + | 9-31 | 8843510-8843587 | 0.85342 | Ortholog | 10/22 | 1/31 |
68 | caeRem3-10 | mir-251 | cel-miR-251 | 24/24 | chrUn | + | 5-28 | 33059048-33059114 | 0.996842 | Ortholog | 2/5 | 1/6 |
69 | caeRem3-40 | mir-244 | cel-miR-244 | 24/24 | chrUn | - | 8-31 | 17603879-17603958 | 0.999203 | Ortholog | 2/5 | 1/6 |
70 | caeRem3-27 | mir-241 | cbr-miR-241 | 19/21 | chrUn | + | 8-27 | 140421379-140421454 | 0.91454 | Ortholog | 2/9 | 1/11 |
71 | caeRem3-45 | mir-239 | cbr-miR-239a | 21/23 | chrUn | - | 15-37 | 26917105-26917190 | 0.997356 | Ortholog | 2/5 | 1/8 |
72 | caeRem3-23 | mir-236 | cel-miR-236 | 23/23 | chrUn | + | 50-72 | 132170893-132170968 | 0.887078 | Ortholog | 2/3 | 1/3 |
73 | caeRem3-51 | mir-232 | cel-miR-232 | 23/23 | chrUn | - | 49-71 | 56798800-56798875 | 0.833461 | Ortholog | 2/3 | 2/6 |
74 | caeRem3-9 | mir-232 | cel-miR-232 | 23/23 | chrUn | + | 50-72 | 31912876-31912954 | 0.853396 | Ortholog | 2/3 | 2/6 |
75 | caeRem3-32 | mir-230 | cel-miR-230 | 23/23 | chrUn | - | 49-71 | 2006540-2006614 | 0.99416 | Ortholog | 2/5 | 1/6 |
76 | caeRem3-32 | mir-230 | cbr-miR-230 | 21/23 | chrUn | - | 50-70 | 2006539-2006615 | 0.996695 | Ortholog | 2/5 | 1/6 |
77 | caeRem3-53 | mir-228 | cel-miR-228 | 23/23 | chrUn | - | 13-35 | 60549601-60549684 | 0.997191 | Ortholog | 2/4 | 1/6 |
78 | caeRem3-36 | mir-1831 | cel-miR-1831 | 20/22 | chrUn | - | 20-41 | 8432951-8433041 | 0.81412 | Ortholog | 1/6 | 1/21 |
79 | caeRem3-8 | mir-1639 | gga-miR-1639 | 20/21 | chrUn | + | 24-44 | 26015184-26015273 | 0.932774 | Ortholog | 1/2 | 1/2 |
80 | caeRem3-22 | mir-1594 | gga-miR-1594 | 19/21 | chrUn | + | 43-63 | 130779799-130779871 | 0.970985 | Ortholog | 1/15 | 1/24 |
81 | caeRem3-68 | mir-1396 | oan-miR-1396 | 19/21 | chrUn | - | 48-68 | 132800149-132800238 | 0.827235 | Ortholog | 1/7 | 1/8 |
82 | caeRem3-54 | mir-1308 | hsa-miR-1308 | 16/18 | chrUn | - | 52-67 | 64274389-64274487 | 0.864116 | Ortholog | 1/18 | 2/45 |
83 | caeRem3-20 | mir-1308 | hsa-miR-1308 | 16/18 | chrUn | + | 54-69 | 106824946-106825030 | 0.895954 | Ortholog | 1/18 | 2/45 |
84 | caeRem3-71 | mir-1 | mmu-miR-1-2-as | 21/21 | chrUn | - | 7-27 | 145319812-145319886 | 0.997183 | Ortholog | 41/61 | 3/166 |
85 | caeRem3-29 | mir-1 | cap-miR-1 | 22/22 | chrUn | + | 50-71 | 145319812-145319888 | 0.997946 | Ortholog | 41/61 | 3/166 |
86 | caeRem3-29 | mir-1 | sko-miR-1 | 20/22 | chrUn | + | 50-70 | 145319812-145319888 | 0.998042 | Ortholog | 41/61 | 3/166 |
87 | caeRem3-72 | mir-1 | odi-miR-1a | 20/22 | chrUn | - | 49-70 | 145925603-145925676 | 0.962655 | Ortholog | 41/61 | 3/166 |
88 | caeRem3-55 | let-7 | spu-let-7 | 21/22 | chrUn | - | 13-34 | 79515437-79515520 | 0.9998 | Ortholog | 44/65 | 1/337 |
89 | caeRem3-55 | let-7 | aga-let-7 | 20/21 | chrUn | - | 12-32 | 79515438-79515519 | 0.999717 | Ortholog | 44/65 | 1/337 |
Total | 89 record(s). |